Index

Symbols

$PATH $PYTHONPATH --cl CL prof-envelopes command line option --datadir DATADIR command line option prof-batchtune command line option --definition DEFINITION prof-sensitivities command line option --direction DIRECTION prof-sampleparams command line option --eigentunes prof-tune command line option --eigentunes-dgof DGOF prof-tune command line option --first-run NUMFIRSTRUN prof-sampleparams command line option --fixed-parameters FIXEDPARAMETERS prof-tune command line option --fromdir prof-mergeminresults command line option --ipol IPOLMETHOD prof-interpolate command line option prof-ipolhistos command line option --ipol-method IPOLMETHOD prof-sensitivities command line option --ipoldir IPOLDIR command line option --ipoldir IPOLDIR, optional prof-batchtune command line option --legend, --no-legend prof-sensitivities command line option --limits LIMITS prof-tune command line option --liny, --logy prof-plotresultscatter command line option --logy prof-sensitivities command line option --make-plots prof-plotresultscatter command line option prof-sensitivities command line option --manual-sp MANUALSTARTPOINT, --manual-startpoint MANUALSTARTPOINT prof-tune command line option --mcdir MCDIR command line option --mcdir MCDIR, optional prof-batchtune command line option --minimizer MINIMIZER prof-tune command line option --minos prof-tune command line option --ndof, --no-ndof prof-plotresultscatter command line option --no-ipolhistos prof-tune command line option --no-weights prof-comparetunes command line option --obsfile OBSFILE prof-envelopes command line option --outdir OUTDIR, -o OUTDIR command line option --paramsfile PARAMETERFILE, --pf PARAMETERFILE prof-sensitivities command line option --paramsrange RANGEFILE, --pr RANGEFILE prof-sensitivities command line option --paramsvector PARAMETERSTRING, --pv PARAMETERSTRING prof-sensitivities command line option --plotmode PLOTMODE prof-sensitivities command line option --ranges RANGEFILE prof-plotresultscatter command line option --refdir REFDIR command line option --results RESULTS prof-scanchi2 command line option --runcombs RUNSFILE:METHOD[,...] prof-scanchi2 command line option

--runs RUNSFILE, --runcombs RUNSFILE prof-interpolate command line option prof-ipolhistos command line option prof-tune command line option --runs RUNSFILE, --runsfile RUNSFILE prof-envelopes command line option --scancenter SCANCENTER prof-sampleparams command line option --splines, --no-splines prof-sensitivities command line option --spmethods STARTPOINTMETHODS, --start-points STARTPOINTMETHODS prof-tune command line option --suffix SUFFIX prof-plotresultscatter command line option --table TABLEFILE prof-sensitivities command line option --tag TAG prof-scanchi2 command line option --weave, --noweave prof-interpolate command line option --weight W prof-lsobs command line option --weights WEIGHTS, --obsfile WEIGHTS prof-batchtune command line option prof-interpolate command line option prof-ipolhistos command line option prof-sensitivities command line option prof-tune command line option --weights WEIGHTSFILE prof-comparetunes command line option -c COMBINATION, --comb COMBINATION prof-runcombs command line option -j JOBBASEOUTDIR, --outdir=JOBBASEOUTDIR prof-batchtune command line option -l, --limits prof-plotresultscatter command line option -L, --no-limits prof-plotresultscatter command line option -m, --maxruns-value prof-plotresultscatter command line option -m, --method prof-showipol command line option -M, --no-method prof-showipol command line option -N NUMRUNS, --num-runs NUMRUNS prof-sampleparams command line option -N NUMSCRIPTS prof-batchtune command line option -N, --no-numruns prof-showipol command line option -n, --numruns prof-showipol command line option -o ADDITIONALOPTIONS, --options ADDITIONALOPTIONS prof-batchtune command line option -O, --no-observables prof-showipol command line option -o, --observables prof-showipol command line option -r RANGEFILE, --range RANGEFILE prof-runcombs command line option -R RUNSFILE, --runsfile RUNSFILE, --runcombs RUNSFILE prof-batchtune command line option prof-sensitivities command line option -R, --no-runs prof-plotresultscatter command line option prof-showipol command line option -r, --runs prof-plotresultscatter command line option prof-showipol command line option -s SCRIPTDIR, --script-outdir SCRIPTDIR prof-batchtune command line option -S, --no-startpoints prof-plotresultscatter command line option -s, --scan prof-sampleparams command line option -s, --startpoints prof-plotresultscatter command line option -T TEMPLATE, --template TEMPLATE prof-sampleparams command line option -t, --timestamp prof-sampleparams command line option -x EXCLUDE, --exclude EXCLUDE prof-runcombs command line option <+--OPTION+> <+METAVAR+> prof-scanchi2 command line option

A

addAnnotation() (professor.histo.Histo method) addBin() (professor.histo.Histo method) addBinRangeWeight() (professor.data.WeightManager method) addDataCLOptions() (in module professor.data) addIpolCLOptions() (in module professor.interpolation) addMCData() (professor.data.DataProxy method) addmethodattribute() (in module professor.tools.decorators) addRun() (professor.interpolation.BinDistribution method) addRunCombsCLOptions() (in module professor.data) addRunPath() (professor.data.ManualMCData method) applyObservableWeights() (professor.data.TuneData method) area() (professor.histo.Bin method) (professor.histo.Histo method)

asAIDA() (professor.histo.Bin method) (professor.histo.Histo method) asDict() (professor.params.base.ParameterBase method) (professor.params.ParameterMatrix method) asFlat() (professor.histo.Bin method) (professor.histo.Histo method) asGnuplot() (professor.histo.Bin method) (professor.histo.Histo method) assertDirR() (in module professor.tools.io) assertDirRW() (in module professor.tools.io) assertDirW() (in module professor.tools.io) assertFileR() (in module professor.tools.io) assertFileRW() (in module professor.tools.io) assertFileW() (in module professor.tools.io) availablehistos (professor.data.MCData attribute) availableruns (professor.data.ManualMCData attribute)

B

Bin (class in professor.histo) BinDistribution (class in professor.interpolation) binid (professor.data.BinProps attribute)

BinProps (class in professor.data) binRanges() (professor.data.Weight method) bins (professor.histo.Histo attribute)

C

calcChi2() (professor.fitfunctions.SimpleIpolChi2 method) (professor.fitfunctions.SimpleMCChi2 method) (professor.fitfunctions.SingleSimpleIpolChi2 method) (professor.fitfunctions.SingleSimpleMCChi2 method) calcChi2PerBin() (professor.fitfunctions.SingleSimpleIpolChi2 method) calcNdof() (professor.fitfunctions.SimpleIpolChi2 method) (professor.fitfunctions.SimpleMCChi2 method) (professor.fitfunctions.SingleSimpleIpolChi2 method) center (professor.params.ParameterRange attribute) checkForClustering() (in module professor.tools.stats)

chop() (professor.histo.Histo method) command line option --datadir DATADIR --ipoldir IPOLDIR --mcdir MCDIR --outdir OUTDIR, -o OUTDIR --refdir REFDIR convertCovMatToArray() (in module professor.tools.stats) convertCovMatToCorrMat() (in module professor.tools.stats)

D

DataProxy (class in professor.data) deprecated() (in module professor.tools.decorators)

diagonal (professor.params.ParameterRange attribute) dim (professor.params.base.ParameterBase attribute)

E

eigenDecomposition() (in module professor.tools.eigen) environment variable $PATH $PYTHONPATH err (professor.histo.Bin attribute)

errminus (professor.histo.Bin attribute) errplus (professor.histo.Bin attribute)

F

fillFromBinDistribution() (professor.interpolation.interpolation.GenericBinInterpolation method) filtered() (professor.minimize.result.ResultList method) filteredValues() (professor.data.TuneData method) findCovarianceMatrix() (professor.fitfunctions.SimpleIpolChi2 method) focus (professor.histo.Bin attribute) format() (professor.params.base.ParameterBase method) (professor.params.ParameterPoint method) fromAIDA() (professor.histo.Histo class method)

fromDirectory() (professor.minimize.result.ResultList class method) fromDPS() (professor.histo.Histo class method) fromFlat() (professor.histo.Histo class method) fromFlatHisto() (professor.histo.Histo class method) fromPickle() (professor.minimize.result.ResultList class method) fullpath (professor.histo.Histo attribute) fullPath() (professor.histo.Histo method)

G

gauss() (in module professor.tools.stats) generate() (professor.tools.pointsampling.RandomPointGenerator method) (professor.tools.pointsampling.ScanPointGenerator method) GenericBinInterpolation (class in professor.interpolation.interpolation) getAnnotation() (professor.histo.Histo method) getArea() (professor.histo.Bin method) (professor.histo.Histo method) getAvailableObservables() (professor.data.MCData method) getBin() (professor.histo.Histo method) (professor.interpolation.interpolation.GenericBinInterpolation method) getBinCenter() (professor.data.BinProps method) (professor.histo.Bin method) (professor.interpolation.interpolation.GenericBinInterpolation method) getBinID() (professor.data.DataProxy static method) getBinIDs() (professor.data.TuneData method) getBinIndex() (professor.data.DataProxy static method) getBinProps() (professor.data.TuneData method) getBins() (professor.histo.Histo method) getCoefficient() (professor.interpolation.interpolation.GenericBinInterpolation method) getCorrelation() (in module professor.tools.stats) getCorrelationMatrix() (professor.minimize.result.ResultList method) getCorrelations() (professor.minimize.result.ResultList method) getCovariances() (professor.minimize.result.ResultList method) getCovMatFromSample() (in module professor.tools.stats) getErr() (professor.histo.Bin method) getExtremalDirections() (in module professor.tools.eigen) getFocus() (professor.histo.Bin method) getGradient() (professor.interpolation.interpolation.GenericBinInterpolation method) getHeaders() (professor.histo.PlotParser method) getHistogramOptions() (professor.histo.PlotParser method) getIndex() (professor.params.base.ParameterBase method) getInterpolationHisto() (professor.data.TuneData method) getInterpolationSet() (professor.data.DataProxy method) getIntersection() (in module professor.tools.permut) getIpolFilePath() (professor.data.DataProxy method) getIpolMethods() (professor.minimize.result.ResultList method) getIpolPath() (professor.data.DataProxy method) getKBest() (professor.minimize.result.ResultList method) getLongVector() (professor.interpolation.interpolation.GenericBinInterpolation method) getMaxRunsResults() (professor.minimize.result.ResultList method) getMCData() (professor.data.DataProxy method) getMedianMCError() (professor.interpolation.BinDistribution method)

getMinimizerClass() (in module professor.minimize) getMinimum() (professor.minimize.result.ResultList method) getName() (professor.interpolation.BinDistribution method) getNormalisedPoint() (professor.params.ParameterRange method) getNumBins() (professor.fitfunctions.SingleSimpleIpolChi2 method) getObservables() (professor.data.TuneData method) (professor.minimize.result.ResultList method) getOutputPath() (professor.data.DataProxy method) getParameterBounds() (professor.data.MCData method) getParameterCmp() (professor.data.ManualMCData method) (professor.data.MCData method) getParameterNames() (professor.data.MCData method) getParamNames() (professor.minimize.result.ResultList method) getParamValues() (professor.minimize.result.ResultList method) getPathsFromCLOptions() (professor.data.DataProxy static method) getProperties() (professor.data.Weight method) getProperty() (professor.data.BinProps method) getRanges() (professor.interpolation.BinDistribution method) getRefData() (professor.data.DataProxy method) (professor.data.proxy.RivetDataProxy method) getRefHisto() (professor.data.DataProxy method) (professor.data.proxy.RivetDataProxy method) getRefPath() (professor.data.DataProxy method) getRelativePoint() (professor.params.ParameterRange method) getResultsInsideKsigmaEllipsisOfM0() (professor.minimize.result.ResultList method) getResultsInsideRange() (professor.minimize.result.ResultList method) getRunCounts() (professor.minimize.result.ResultList method) getRunHistos() (professor.data.MCData method) getRunParams() (professor.data.MCData method) getSampleCorrelations() (professor.minimize.result.ResultList method) getSampleCovMat() (professor.minimize.result.ResultList method) getScanParam() (professor.data.MCData method) getSection() (professor.histo.PlotParser method) getSpecial() (professor.histo.PlotParser method) getTuneData() (professor.data.DataProxy method) getUnique() (professor.minimize.result.ResultList method) getVal() (professor.histo.Bin method) getValue() (professor.interpolation.interpolation.GenericBinInterpolation method) getWeight() (professor.data.Weight method) (professor.data.WeightManager method) getXRange() (professor.histo.Bin method) getYRange() (professor.histo.Bin method)

H

header() (professor.histo.Histo method) high (professor.params.ParameterRange attribute) Histo (class in professor.histo)

histopath (professor.histo.Histo attribute) histoPath() (professor.histo.Histo method)

I

InterpolationSet (class in professor.interpolation) ipol (professor.data.BinProps attribute) ipolmethod (professor.data.TuneData attribute) ipolpath (professor.data.DataProxy attribute) isComment() (professor.histo.PlotParser method) isDirR() (in module professor.tools.io) isDirRW() (in module professor.tools.io) isDirW() (in module professor.tools.io)

isEndMarker() (professor.histo.PlotParser method) isFileR() (in module professor.tools.io) isFileRW() (in module professor.tools.io) isFileW() (in module professor.tools.io) isInside() (professor.params.ParameterRange method) isValid() (professor.minimize.result.ResultList method) isValidRunDir() (professor.data.MCData method)

K

keys() (professor.params.base.ParameterBase method)

L

listInterpolationSets() (professor.data.DataProxy method) loadAllRuns() (professor.data.MCData method) loadAllThreaded() (professor.data.MCData method) loadedruns (professor.data.MCData attribute)

loadRun() (professor.data.ManualMCData method) (professor.data.MCData method) loadWeightsFile() (professor.data.WeightManager method) low (professor.params.ParameterRange attribute)

M

makeDir() (in module professor.tools.io) ManualMCData (class in professor.data) MCData (class in professor.data) mcdict (professor.data.BinProps attribute) mean() (professor.minimize.result.ResultList method) minimumOverlapCovariance() (professor.fitfunctions.SimpleIpolChi2 method) minNumOfRuns() (professor.interpolation.interpolation.GenericBinInterpolation method) mkDiagonal() (professor.tools.pointsampling.ScanPointGenerator class method) mkFromCLOptions() (professor.data.DataProxy class method) (professor.data.proxy.RivetDataProxy class method)

mkFromDict() (professor.params.base.ParameterBase class method) (professor.params.ParameterMatrix class method) mkFromDirectory() (professor.minimize.result.ResultList class method) mkFromFile() (professor.data.WeightManager class method) (professor.params.base.ParameterBase class method) mkFromPickle() (professor.minimize.result.ResultList class method) mkFromPoints() (professor.params.ParameterRange class method) mkFromString() (professor.params.ParameterPoint class method) (professor.params.ParameterRange class method) mkShallow() (professor.tools.pointsampling.ScanPointGenerator class method) mkSteep() (professor.tools.pointsampling.ScanPointGenerator class method) mkSubRangeDiagonal() (professor.tools.pointsampling.ScanPointGenerator class method)

N

n_choose_k() (in module professor.tools.stats) names (professor.minimize.result.ResultList attribute) (professor.params.base.ParameterBase attribute) nCr() (in module professor.tools.permut) newPoint() (professor.tools.pointsampling.RandomPointGenerator method) (professor.tools.pointsampling.ScanPointGenerator method) numberOfRuns() (professor.interpolation.BinDistribution method)

numbins (professor.fitfunctions.SingleSimpleIpolChi2 attribute) numBins() (professor.histo.Histo method) numOfCoefficients() (professor.interpolation.interpolation.GenericBinInterpolation method) numParams() (professor.data.TuneData method)

O

obs (professor.fitfunctions.SingleSimpleIpolChi2 attribute) observables (professor.data.TuneData attribute) (professor.data.WeightManager attribute)

outdir (professor.data.DataProxy attribute)

P

ParameterBase (class in professor.params.base) ParameterErrors (class in professor.params) ParameterMatrix (class in professor.params) ParameterPoint (class in professor.params) ParameterRange (class in professor.params) PlotParser (class in professor.histo) prof-batchtune command line option --datadir DATADIR --ipoldir IPOLDIR, optional --mcdir MCDIR, optional --weights WEIGHTS, --obsfile WEIGHTS -N NUMSCRIPTS -R RUNSFILE, --runsfile RUNSFILE, --runcombs RUNSFILE -j JOBBASEOUTDIR, --outdir=JOBBASEOUTDIR -o ADDITIONALOPTIONS, --options ADDITIONALOPTIONS -s SCRIPTDIR, --script-outdir SCRIPTDIR prof-comparetunes command line option --no-weights --weights WEIGHTSFILE prof-envelopes command line option --cl CL --obsfile OBSFILE --runs RUNSFILE, --runsfile RUNSFILE prof-interpolate command line option --ipol IPOLMETHOD --runs RUNSFILE, --runcombs RUNSFILE --weave, --noweave --weights WEIGHTS, --obsfile WEIGHTS prof-ipolhistos command line option --ipol IPOLMETHOD --runs RUNSFILE, --runcombs RUNSFILE --weights WEIGHTS, --obsfile WEIGHTS prof-lsobs command line option --weight W prof-mergeminresults command line option --fromdir prof-plotresultscatter command line option --liny, --logy --make-plots --ndof, --no-ndof --ranges RANGEFILE --suffix SUFFIX -L, --no-limits -R, --no-runs -S, --no-startpoints -l, --limits -m, --maxruns-value -r, --runs -s, --startpoints prof-runcombs command line option -c COMBINATION, --comb COMBINATION -r RANGEFILE, --range RANGEFILE -x EXCLUDE, --exclude EXCLUDE prof-sampleparams command line option --direction DIRECTION --first-run NUMFIRSTRUN --scancenter SCANCENTER -N NUMRUNS, --num-runs NUMRUNS -T TEMPLATE, --template TEMPLATE -s, --scan -t, --timestamp

prof-scanchi2 command line option --results RESULTS --runcombs RUNSFILE:METHOD[,...] --tag TAG <+--OPTION+> <+METAVAR+> prof-sensitivities command line option --definition DEFINITION --ipol-method IPOLMETHOD --legend, --no-legend --logy --make-plots --paramsfile PARAMETERFILE, --pf PARAMETERFILE --paramsrange RANGEFILE, --pr RANGEFILE --paramsvector PARAMETERSTRING, --pv PARAMETERSTRING --plotmode PLOTMODE --splines, --no-splines --table TABLEFILE --weights WEIGHTS, --obsfile WEIGHTS -R RUNSFILE, --runsfile RUNSFILE, --runcombs RUNSFILE prof-showipol command line option -M, --no-method -N, --no-numruns -O, --no-observables -R, --no-runs -m, --method -n, --numruns -o, --observables -r, --runs prof-tune command line option --eigentunes --eigentunes-dgof DGOF --fixed-parameters FIXEDPARAMETERS --limits LIMITS --manual-sp MANUALSTARTPOINT, --manual-startpoint MANUALSTARTPOINT --minimizer MINIMIZER --minos --no-ipolhistos --runs RUNSFILE, --runcombs RUNSFILE --spmethods STARTPOINTMETHODS, --start-points STARTPOINTMETHODS --weights WEIGHTS, --obsfile WEIGHTS professor.data (module) professor.fitfunctions (module) professor.histo (module) professor.interpolation (module) professor.minimize (module) professor.params (module) professor.tools.decorators (module) professor.tools.eigen (module) professor.tools.io (module) professor.tools.permut (module) professor.tools.pointsampling (module) professor.tools.stats (module)

R

RandomPointGenerator (class in professor.tools.pointsampling) randomUniqueCombinations() (in module professor.tools.permut) refbin (professor.data.BinProps attribute) refpath (professor.data.DataProxy attribute)

renormalise() (professor.histo.Histo method) ResultList (class in professor.minimize.result) RivetDataProxy (class in professor.data.proxy) rms() (in module professor.tools.stats)

S

ScanPointGenerator (class in professor.tools.pointsampling) seed() (professor.tools.pointsampling.RandomPointGenerator static method) (professor.tools.pointsampling.ScanPointGenerator static method) setBins() (professor.histo.Histo method) setDataPath() (professor.data.DataProxy method) setErr() (professor.histo.Bin method) setIpolPath() (professor.data.DataProxy method) setMCPath() (professor.data.DataProxy method) setObs() (professor.fitfunctions.SingleSimpleIpolChi2 method) setOutputPath() (professor.data.DataProxy method) setParams() (professor.fitfunctions.SimpleIpolChi2 method) (professor.fitfunctions.SimpleMCChi2 method) (professor.fitfunctions.SingleSimpleMCChi2 method) setProperties() (professor.data.BinProps method) (professor.data.Weight method) setProperty() (professor.data.BinProps method) (professor.data.Weight method)

setRefPath() (professor.data.DataProxy method) setSqrtWeight() (professor.data.BinProps method) setWeight() (professor.data.BinProps method) (professor.data.Weight method) setXRange() (professor.histo.Bin method) setYRange() (professor.histo.Bin method) shuffledCombinations() (in module professor.tools.permut) SimpleIpolChi2 (class in professor.fitfunctions) SimpleMCChi2 (class in professor.fitfunctions) SingleSimpleIpolChi2 (class in professor.fitfunctions) SingleSimpleMCChi2 (class in professor.fitfunctions) splitBinID() (professor.data.DataProxy static method) sqrtweight (professor.data.BinProps attribute)

T

testReadDir() (in module professor.tools.io) testReadFile() (in module professor.tools.io) testReadWriteDir() (in module professor.tools.io) testReadWriteFile() (in module professor.tools.io) testWriteDir() (in module professor.tools.io)

testWriteFile() (in module professor.tools.io) transformParameter() (in module professor.tools.eigen) translateCovariance() (professor.minimize.result.ResultList method) TuneData (class in professor.data)

U

updateHistoHeaders() (professor.histo.PlotParser method)

V

val (professor.histo.Bin attribute) veto (professor.data.BinProps attribute) vetoEmptyErrors() (professor.data.TuneData method)

virtualmethod() (in module professor.tools.decorators) VirtualMethodError

W

Weight (class in professor.data) weight (professor.data.BinProps attribute) weightedMean() (in module professor.tools.stats)

WeightManager (class in professor.data) write() (professor.minimize.result.ResultList method) writeParamFile() (professor.params.base.ParameterBase method)

X

xhigh (professor.histo.Bin attribute) xlow (professor.histo.Bin attribute)

xrandomUniqueCombinations() (in module professor.tools.permut) xuniqueCombinations() (in module professor.tools.permut)

Y

yhigh (professor.histo.Bin attribute)

ylow (professor.histo.Bin attribute)